Software Resources

• Monochromatic clustering of epistatic networks (PRISM algorithm)

  The flux balance predictions for this work were computed using

  Xpress-MP Suite Leading Optimization Software Linear Programming Mixed Integer Programming

   

• Flux Balance Analysis and Minimization of Metabolic Adjustment (MOMA) resources

  This page includes a variety of scripts and links for doing Flux Balance Analysis using open source software. The page is no longer maintained. Here is the latest version of a downloadable open source FBA/MOMA software for Windows XP. For more recent versions of stoichiometric models, see here.

   

• Simulations of compositional information transfer in prebiotic molecular assemblies